Package: epiviz 0.1.2

Harshana Liyanage

epiviz: Data Visualisation Functions for Epidemiological Data Science Products

Tools for making epidemiological reporting easier with consistent static and dynamic charts and maps. Builds on 'ggplot2' for static visualizations as described in Wickham (2016) <doi:10.1007/978-3-319-24277-4> and 'plotly' for interactive visualizations as described in Sievert (2020) <doi:10.1201/9780429447273>.

Authors:Harshana Liyanage [aut, cre], James Duke [aut], Alex Bhattacharya [aut], Liam Fitzpatrick [aut], James Leatherland [aut], Jordan Worth [aut], Emma Parker [aut], Jade Talbot [ctb], Karen Crawford [ctb], Frederick Sloots [ctb], Charlie Turner [ctb]

epiviz_0.1.2.tar.gz
epiviz_0.1.2.zip(r-4.7)epiviz_0.1.2.zip(r-4.6)epiviz_0.1.2.zip(r-4.5)
epiviz_0.1.2.tgz(r-4.6-any)epiviz_0.1.2.tgz(r-4.5-any)
epiviz_0.1.2.tar.gz(r-4.7-any)epiviz_0.1.2.tar.gz(r-4.6-any)
epiviz_0.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
epiviz/json (API)
NEWS

# Install 'epiviz' in R:
install.packages('epiviz', repos = c('https://ukhsa-collaboration.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ukhsa-collaboration/epiviz/issues

Datasets:
  • lab_data - Synthetic Lab Data for EpiViz functions

On CRAN:

Conda:

6.98 score 4 stars 43 scripts 565 downloads 7 exports 92 dependencies

Last updated from:2f820bb931. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK225
source / vignettesOK253
linux-release-x86_64OK214
macos-release-arm64OK182
macos-oldrel-arm64OK147
windows-develOK199
windows-releaseOK175
windows-oldrelOK195
wasm-releaseOK169

Exports:age_sex_pyramidcol_chartepi_curveepi_mapline_chartllm_interpretpoint_chart

Dependencies:askpassassertthatbase64encbslibcachemclassclassIntclicorocpp11crosstalkcurldata.tableDBIdigestdplyre1071ellmerevaluatefarverfastmapfontawesomeforcatsfsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttrhttr2isobandISOweekjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevalleafletleaflet.providerslifecyclelubridatemagrittrMASSmemoisemimeopensslotelpillarpkgconfigplotlypngpromisesproxypurrrR6rappdirsrasterRColorBrewerRcpprlangrmarkdowns2S7sassscalessfsliderspstringistringrsysterratibbletidyrtidyselecttimechangetinytexunitsutf8vctrsviridisLitewarpwithrwkxfunyaml

Age-sex pyramids

Rendered fromage-sex-pyramid.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-16
Started: 2025-10-16

Column charts

Rendered fromcol-chart.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-16
Started: 2025-10-16

Epi curves

Rendered fromepi-curve.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-30
Started: 2025-10-16

Epidemiological maps

Rendered fromepi-map.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-16
Started: 2025-10-16

Getting started with epiviz

Rendered fromgetting-started.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-16
Started: 2025-10-16

Line charts

Rendered fromline-chart.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-30
Started: 2025-10-16

LLM-assisted epidemiological narrative

Rendered fromllm-interpret.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-30
Started: 2025-10-16

Point charts

Rendered frompoint-chart.Rmdusingknitr::rmarkdownon Jun 04 2026.

Last update: 2025-10-30
Started: 2025-10-16